PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108629.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bZIP
Protein Properties Length: 279aa    MW: 30560.6 Da    PI: 6.1792
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108629.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.91.9e-12197257362
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 
                     + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+e ++L k+++e+ k+  ++l  +
  XP_010108629.1 197 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEEHERLlKEKAERTKERLKQLMEK 257
                     679*************************************997256677888777777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-11192256No hitNo description
SMARTSM003383.1E-8195257IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.45197249IPR004827Basic-leucine zipper domain
PfamPF001701.0E-10197257IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.61E-9199250No hitNo description
CDDcd147075.72E-17199245No hitNo description
PROSITE patternPS000360202217IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MASSKVMGSS NSDISRKSSS ASSKPKAPPS LGLAMSVDGL LRDADSSSST LLLDSEITLL  60
DAANSAGGGP KTVDEVWREI VSGGGQRNKE CKEEAPDVMM TLEDFLLAKT GGPEADEDEE  120
EEDVKNFLPP PPQLTERLSG GLFAFDAIPP PTPLQALDKV EGSIVGFGNG VEVIGGGGGG  180
RGKRGRCSVL EPLDKAAQQR QRRMIKNRES AARSRERKQA YQVELESLAV RLEEEHERLL  240
KEKAERTKER LKQLMEKVIP IEERRRPPRA LRRVRSFQW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108629.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010108629.10.0G-box-binding factor 4
SwissprotP427778e-56GBF4_ARATH; G-box-binding factor 4
TrEMBLW9S8610.0W9S861_9ROSA; G-box-binding factor 4
STRINGXP_010108629.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.16e-32bZIP family protein