PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010109064.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 208aa MW: 23407.6 Da PI: 8.9163

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010109064.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.1	2.4e-06	42	89	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR ++ + Lr++lP + ++K s ++ +A +YIk+L+ XP_010109064.1 42 RDNERQRRLQMAFLNSSLRSILPLEM--IKGKRSVSDHMHEAANYIKYLK 89 679*******************63..******************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.4E-9	35	107	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.931	36	88	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.4E-6	40	107	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
MDMGRGRGRH HKTIFSISNN NNNINAEANT TCDYNERKIV RRDNERQRRL QMAFLNSSLR 60 SILPLEMIKG KRSVSDHMHE AANYIKYLKN KIETLKIKRD ELKNSFDSSA QSSDSGGRSY 120 NSGNLLNSVI VLPCLGGVEI VISSSLVLSR VLEILLEEGL NVVGCSSTRV NERLIHTIQS 180 EVVDLNNTSL DLNELQQKLY ALLCSISQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010109064.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010109064.1	1e-149	transcription factor bHLH118
TrEMBL	W9S1D9	1e-148	W9S1D9_9ROSA; Uncharacterized protein
STRING	XP_010109064.1	1e-148	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	6e-26	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21396129