PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109066.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 220aa    MW: 25936.6 Da    PI: 10.1279
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109066.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.4e-1278130155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+ h e+Er+RR+++ + f  Lr+l+P  +   ++K s  e   +Av YI++L+
  XP_010109066.1  78 KRKIHREIERQRRQEMATLFVSLRSLIPLEF--IKGKRSTHEYMSEAVTYINHLK 130
                     7999*************************65..********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.03E-1574145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.91E-975134No hitNo description
PROSITE profilePS5088813.63777129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-1078129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-1178153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-683135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE patternPS002820174197IPR002350Kazal domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MTLKPSKNLV EMFPLRQSNK LNSYINFFNA HQNCQISEDL ILMSHASADV GGRRFNNSTG  60
KSQRKRKFTD QNSTDNEKRK IHREIERQRR QEMATLFVSL RSLIPLEFIK GKRSTHEYMS  120
EAVTYINHLK KKIRELETKR NELKELLNLR NNINQIDSEN RKYSNRCFTI RPSCGGIQVV  180
ICSPYGEEYR TVCRFTCMEQ TELEQRLSEV NPSLKHMISQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17789KRKIHREIERQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109066.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9S9E31e-161W9S9E3_9ROSA; Uncharacterized protein
STRINGXP_010109066.11e-162(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.17e-12bHLH family protein