PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109475.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 791aa    MW: 91395.2 Da    PI: 8.4682
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109475.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-07583625146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r +WT+eE e + d vk++G++ Wkt + ++   + + +ck+ w+ 
   XP_010109475.1 583 RRKWTAEEYEYIRDFVKEHGTN-WKTLSTELK--KHRFHCKDTWRR 625
                      679*****************99.********8..78899**99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.017509580IPR001005SANT/Myb domain
PROSITE profilePS500907.747578627IPR017877Myb-like domain
SuperFamilySSF466893.52E-7582636IPR009057Homeodomain-like
SMARTSM007171.3582629IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-6585637IPR009057Homeodomain-like
PfamPF139215.0E-9586644No hitNo description
PROSITE profilePS500907.48628696IPR017877Myb-like domain
SMARTSM007172.6632698IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.5E-6638698IPR009057Homeodomain-like
SuperFamilySSF466891.47E-5676754IPR009057Homeodomain-like
PROSITE profilePS500907.329698751IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    Send to blast
MGEKQQENKG RKTEKNKEKK IELEKDEMEF HKSKKKDKVV SKDAISDDVV GALKIAGVEG  60
KENTNARSNG RKDSVDDSEE RKEKKNKRKV KKKKEGVDGT SSEVENSEAE KRDELVKGYE  120
NRGGVPVENG EEERAKKNKK KKKEKEGSHN EVKNSMTNEE TVAKERMHLD GKIKEHGKLA  180
VKEKNLDKIR GNAQKGAENG DVAEVSNDKD GGKSKKKKKK KIREREAAFD EVEDEMEVDE  240
EGDKSKMKKK RKMENDDEMK TNEEGDRIKK KERKRDSVSG EVENEMKTNE EREESKKKKE  300
RKKENSSAEV EDEMQTNEEG EKSKKKKERK RENASNEVEN YMNTNEEGEK SKKKKRSKKE  360
IVSDDVEDQM KTDEEVDKSK KTRKREYVSA DVEDKPEIDE RDKSKKNKER KREIVSGDVE  420
DKSDELGKGD GGSKHKKKKG KAKKKVSSGE AHKGKAIIEK DIEVADTFEN PSPQGKSKRV  480
SFSDHVEVFL DDSPSGGESI SDQGEGLVQG KRFTPKEDDL VKKAVLGYIE DHNLGDDGLH  540
MILNCISYPE VKGCWKEISA ALPWRPATSV YYRGHMLFER DERRKWTAEE YEYIRDFVKE  600
HGTNWKTLST ELKKHRFHCK DTWRRIKQIN LRKGCWAQEE YQTLFDLVNM DLHMRALEER  660
KSKHGMLRDN ICWGSISDRL STRSDATCCT KWYSQLTSPM VQQGLWSDTD DYRLLNALSS  720
VDAPCLEDVD WDNLLDHRDG DICRKRWNQM VKHIGEYGLK TFSEQVEVLA NRYSPDCIKA  780
REEFDSKPIL P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18391KKNKRKVKK
28694KRKVKKKKE
38794RKVKKKKE
4214220KKKKKKK
5351358KKKKRSKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109475.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109475.10.0RNA polymerase I termination factor
TrEMBLW9SD240.0W9SD24_9ROSA; Myb domain-containing protein
STRINGXP_010109475.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67041931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-127MYB_related family protein