PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010109477.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

TCP

Protein Properties

Length: 164aa MW: 17922.9 Da PI: 5.0971

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010109477.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.5	7.6e-28	11	125	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................ssssasecea 75 +k++r++++hTkv+gR+ RvRl+a caar+ +L++eLG+++d++tieWLl+ a+ + ++ t +s s+s ce+ XP_010109477.1 11 SAKRSRSKDRHTKVSGRGCRVRLPAMCAARVSQLTRELGYKTDGQTIEWLLEHAQLPSIGAAATatctgngvvlggetnansslpPSCSESVCEK 105 5799**************************************************96666666565899999999887655543332222245555 PP TCP 76 esssssasnsssg......k 89 +++++++ +s s+ XP_010109477.1 106 KDHVVKKCHSFSRdqpafdF 125 55555544444443333330 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	9.6E-24	16	149	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	19.692	17	71	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MNSEISSTGP SAKRSRSKDR HTKVSGRGCR VRLPAMCAAR VSQLTRELGY KTDGQTIEWL 60 LEHAQLPSIG AAATATCTGN GVVLGGETNA NSSLPPSCSE SVCEKKDHVV KKCHSFSRDQ 120 PAFDFDLLTN FDMEFSANEI ALLQALTSET QEEEAEEEED KRKE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010109477.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010109477.1	1e-119	transcription factor TCP9
Swissprot	O64647	3e-26	TCP9_ARATH; Transcription factor TCP9
TrEMBL	W9S2L7	1e-118	W9S2L7_9ROSA; Uncharacterized protein
STRING	XP_010109477.1	1e-119	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3819	33	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	5e-26	TCP family protein

Link Out ? help Back to Top
Entrez Gene	21390895