PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109560.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 323aa    MW: 34924.4 Da    PI: 5.6111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109560.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH246.9e-08193235855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+++ ++   L++llP++     kK++ a++Le+A +Y+k Lq
  XP_010109560.1 193 LARQRRQKLSDKTRCLQKLLPWD-----KKMDMATMLEEAYKYVKFLQ 235
                     669*******************9.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.62185234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.77E-11191244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.97E-8191239No hitNo description
SMARTSM003534.7E-8191240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-10192243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-5193235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDTDFQSDYE SFLANSAAAS AGECSSDDIS TFNSMFSNVS LLSLLTSTPN QDALLSSLPL  60
LSDFTSLSSS STTIPPPPGF VFFPNAITPK PEPLPFTDFT DETNHLPRPP QPPVTPTPPF  120
NFMFADTESP AFHHLPDLLS LDHFSPSAAG EEYSPPSSSS LKRLRADSTS TSHHQASPPP  180
PPPPPMVPRG SALARQRRQK LSDKTRCLQK LLPWDKKMDM ATMLEEAYKY VKFLQAQLAA  240
LQSMPAVASS SSSAGVESFG GLGRLNGNQL LQVLVNSPVA QTTLYSKGCC VFSVEQLGLL  300
ERLADMSRIT SSVARNSLPP NRF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109560.10.0transcription factor bHLH117
TrEMBLW9SRS00.0W9SRS0_9ROSA; Uncharacterized protein
STRINGXP_010109560.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134262124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.17e-21bHLH family protein