PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109885.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family G2-like
Protein Properties Length: 347aa    MW: 39328.5 Da    PI: 10.5563
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109885.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.8e-3192145255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+ave+LGG+ekAtPk +l+lm+v gL++ hvkSHLQ+YR+
  XP_010109885.1  92 PRLRWTPDLHLSFVHAVERLGGQEKATPKLVLQLMNVRGLSIGHVKSHLQMYRS 145
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.28288148IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-2988146IPR009057Homeodomain-like
SuperFamilySSF466895.02E-1490146IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-2292147IPR006447Myb domain, plants
PfamPF002491.6E-893144IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MKKAVLNLGG DTRISESQAE KMMISHLQYS ASKNCSSFDL NEEAAIRSAS TTREKYAGLI  60
ADYGNEMHRN SSSANRKEGK GRVRQYVRSK MPRLRWTPDL HLSFVHAVER LGGQEKATPK  120
LVLQLMNVRG LSIGHVKSHL QMYRSKKLDD AGQLVLFPRY RSKHGRDSQQ HLTLMENSTN  180
ITDQNSNHLN LVHSLVKSAL PRKPLDLKAN IFRSTTSNQV QVPIKRNRFL EQERWPPFET  240
INNTKSVNIG ANITWVNTNS TTTIQSLMNN FGTNGTTLTK FLSRSRSNGY KPNLDRPFQP  300
LQLNPEKVLE EEETVPDLQL GLSQEYKSTS NYKSTQEPST KLSLSLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A9e-1893147357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-1893147357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-1893147357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-1893147357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-1793147458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109885.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109885.10.0myb family transcription factor PHL13
RefseqXP_024030180.10.0myb family transcription factor PHL13
RefseqXP_024030181.10.0myb family transcription factor PHL13
RefseqXP_024030182.10.0myb family transcription factor PHL13
RefseqXP_024030183.10.0myb family transcription factor PHL13
RefseqXP_024030184.10.0myb family transcription factor PHL13
TrEMBLW9S3S10.0W9S3S1_9ROSA; Putative Myb family transcription factor
STRINGXP_010109885.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-38G2-like family protein