PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010109922.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

GeBP

Protein Properties

Length: 219aa MW: 25006.5 Da PI: 10.4776

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010109922.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	41.7	3.2e-13	17	116	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..........spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 + r++se+De+ lL+ + + ++ s+ +++ + +++s+ +++s++q+++K+rrLK K++++ ++ + ++++hd XP_010109922.1 17 SPRVFSESDEVHLLKTFRKISKSSSCssfsnspsslSSLTITSQHLDLIESSLGLRFSHTQIIDKLRRLKLKYHRQART-----KSLIRTHHDLR 106 689************9998777763444433322333346778899**********************99998.....678999* PP DUF573 88 ifelskkiWg 97 +s++iWg XP_010109922.1 107 LHRISRSIWG 116 *******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.1E-12	18	116	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
MTTSNSDPPH LSSPPQSPRV FSESDEVHLL KTFRKISKSS SCSSFSNSPS SLSSLTITSQ 60 HLDLIESSLG LRFSHTQIID KLRRLKLKYH RQARTKSLIR THHDLRLHRI SRSIWGRINI 120 NSAKRHIAFH QEKGENNTDA AAVGLEDFPF LKEEFSRILP ENGVWKQGLK CLGAEKMRGF 180 NEEWMLVRKE EAELRAKRAE LEKELIHLLV PPFGSSSIS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010109922.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015873627.1	1e-57	probable transcription factor At1g61730
TrEMBL	W9SBT1	1e-157	W9SBT1_9ROSA; Uncharacterized protein
STRING	XP_010109922.1	1e-158	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18296	3	3

Link Out ? help Back to Top
Entrez Gene	21395004