PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110131.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GRF
Protein Properties Length: 572aa    MW: 61580.8 Da    PI: 8.3948
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110131.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.13.6e-24223267145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e 
  XP_010110131.1 223 DPEPGRCRRTDGKKWRCSRDAVSDQKYCERHINRGRHRSRKPVEG 267
                     79****************************************985 PP
2QLQ60.35.6e-21155190237
             QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                      FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k
  XP_010110131.1 155 LFTPSQWMELEQQALIYKYITANVPIPSNLLIPIRK 190
                     6*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009517.2E-12154190IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.13155190IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088804.1E-15156189IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.202223267IPR014977WRC domain
PfamPF088791.5E-20224266IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MDFRVVGLDH EAGFSPHISD PETKQKTLYG SGFSNKQERS EGTAEDDYWR SSKLAKSGGG  60
DDTDFLASKA MVSQKNSSLL RSNSGLGFLD NGQPQTQMLS FSTPKSEPFL ADRSSHNATL  120
AYIPNALSAY NGRNITGFNS GSLVNGGNTH GEKGLFTPSQ WMELEQQALI YKYITANVPI  180
PSNLLIPIRK AFESAGFSSS PSLLRPNTLG WGSFHLGFSN NADPEPGRCR RTDGKKWRCS  240
RDAVSDQKYC ERHINRGRHR SRKPVEGQTG HSLAGAAVST TTTAAAATAT SSSSVVTMPC  300
GGASNSRAIP INRQHMQSLD IGASNSSAAT SHNNRMFVKD TAGERIQSTP GGLSFLSKES  360
SLFMTRKHHI PYDEASRTEF GLVTSDSFLN PTSQKTQETQ HSLGQLMDAQ RDRTQLSISI  420
PDMAQASSEF NSETNLSPLR LSREQGTPST NHHQHHHRQA NWIPISWETS LGGPLGEVLH  480
HTNNNNANSA DCKRSSSSTS SVLNLMTEGW DTGPPMGSSP TGVLQKTAFG SLSNSSAGSS  540
PRAENNKALE GASLCNDLLG SVHLNSSSLS TL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110131.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110131.10.0growth-regulating factor 1
TrEMBLW9S4A60.0W9S4A6_9ROSA; Uncharacterized protein
STRINGXP_010110131.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20853481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.14e-82growth-regulating factor 1