PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110748.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 228aa    MW: 25290.3 Da    PI: 9.0287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110748.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-1754102355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +grWvAeI+d s   ++ r +lg+f+t+e+Aa a+++a++ l+g
  XP_010110748.1  54 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDTPEDAALAYDKAARLLRG 102
                     67******.7*********42...36***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.2E-3453117IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-2853111IPR001471AP2/ERF domain
PROSITE profilePS5103220.23153110IPR001471AP2/ERF domain
CDDcd000183.74E-3153112No hitNo description
SuperFamilySSF541711.05E-1954111IPR016177DNA-binding domain
PRINTSPR003673.7E-75465IPR001471AP2/ERF domain
PfamPF008479.0E-1156102IPR001471AP2/ERF domain
PRINTSPR003673.7E-77692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDNLESSKIP SDHSQNQITK HSSTININGA EKFIHENGEG KRVMKINKGN IRRFLGVRQR  60
PSGRWVAEIK DSSQKLRLWL GTFDTPEDAA LAYDKAARLL RGRNAKTNFP NQGFLNSHEE  120
NCSILGKNPR LCQVLKHALM KNKARSNLSS SSLGSAIDIN RWRDRNMGEE FDSVSFDAIV  180
EETIVCSSSN EDGVDDDGQR NKLCTLSLGS SKVYSSVVVA PSFSASQC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1652110160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110748.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110748.11e-169ethylene-responsive transcription factor ERF010
TrEMBLW9SE251e-168W9SE25_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010110748.11e-168(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF123492734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-28related to AP2 11