PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110815.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 259aa    MW: 28800.3 Da    PI: 6.858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110815.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.97.4e-27111461127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                     lppG+rFhP+deel+ +yL  k ++      e ++ i e+d+y ++P +Lp+          + k+ ++F+ +   + +++  +r ++sg+W+ +
  XP_010110815.1  11 LPPGVRFHPSDEELLRHYLSGKNAEPGgarAEGNNLIGELDLYGYDPFELPNsacyayG--CGGKKRHWFCYTGGGAVRERGGKRRARSGFWRRK 103
                     79*******************988776655666667***************54665332..2445455555555554555555666799****** PP

             NAM  87 gkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyr 127
                     g+ + v+ + ++ + g+++ +vfy g +a+++ +t+Wv+ ey+
  XP_010110815.1 104 GRMRIVMGQgGRGDLGTRTKFVFYLGnSAKTAFRTNWVLYEYA 146
                     *******9966678**********874677778*********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-316163IPR003441NAC domain
PROSITE profilePS5100535.04411163IPR003441NAC domain
PfamPF023651.7E-1612146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MGDANATSFP LPPGVRFHPS DEELLRHYLS GKNAEPGGAR AEGNNLIGEL DLYGYDPFEL  60
PNSACYAYGC GGKKRHWFCY TGGGAVRERG GKRRARSGFW RRKGRMRIVM GQGGRGDLGT  120
RTKFVFYLGN SAKTAFRTNW VLYEYAPIDH LKASFVLCRV FNKSCPRNSI SENGLVSCAE  180
ESFSAVRHIG IQHDGDNISS RNDDIEVDDQ IATRPAPMAS IQVPLCSEPN TQMNIDAFTD  240
DHLLAILNED FLELDDLNR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-22716416169NAC domain-containing protein 19
3swm_B2e-22716416169NAC domain-containing protein 19
3swm_C2e-22716416169NAC domain-containing protein 19
3swm_D2e-22716416169NAC domain-containing protein 19
3swp_A2e-22716416169NAC domain-containing protein 19
3swp_B2e-22716416169NAC domain-containing protein 19
3swp_C2e-22716416169NAC domain-containing protein 19
3swp_D2e-22716416169NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110815.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110815.10.0NAC domain-containing protein 19
TrEMBLW9S6970.0W9S697_9ROSA; NAC domain-containing protein 19
STRINGXP_010110815.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130012628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.13e-25NAC domain containing protein 19