PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111191.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 183aa    MW: 19258.8 Da    PI: 9.7921
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111191.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-201363256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  XP_010111191.1 13 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 63
                    69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-131362IPR001471AP2/ERF domain
SMARTSM003808.3E-351376IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.5E-321370IPR001471AP2/ERF domain
PROSITE profilePS5103222.7211370IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-221371IPR016177DNA-binding domain
CDDcd000185.03E-281371No hitNo description
PRINTSPR003675.4E-111425IPR001471AP2/ERF domain
PRINTSPR003675.4E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MASSSSGSSR EGHYRGVRKR PWGRYAAEIR DPWKKTRVWL GTFDTPEEAA LAYDGAARSL  60
RGAKAKTNFP APVTAGLSLD LNLPSSAAHW TSPASRLVLG EFLHTGVLKN VSCCAGAAEP  120
IPVKREAPAL SASLGVGGAA NGYSAPDVPG ATSFLGLVRR GCWDGCVWAA PLISTSLRRY  180
GCE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-231376569ATERF1
3gcc_A9e-231376569ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111191.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111191.21e-102LOW QUALITY PROTEIN: ethylene-responsive transcription factor 12
TrEMBLW9SHR81e-128W9SHR8_9ROSA; Ethylene-responsive transcription factor 12
STRINGXP_010111191.11e-129(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-40ERF domain protein 12