PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010111483.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Dof

Protein Properties

Length: 377aa MW: 39535.6 Da PI: 8.8042

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010111483.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.6e-39	89	148	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_010111483.1 89 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 148 6789*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-37	72	146	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-32	91	146	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.544	92	146	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	94	130	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MVFSSLPAYH HHHHDPSNWQ QQPNHPITGI STTTTAAAAS VITSQQLLSP LVPSLPPPPS 60 QPHGSGGAGS IRPGSMADRA RMANIPMPET ALKCPRCEST NTKFCYFNNY SLTQPRHFCK 120 TCRRYWTRGG ALRNVPVGGG CRRNKRSKGT SSSSGGGGGG SSSKSSAATA SGSSGAIPSN 180 NSGAASAAEI LGLTQQLPAA LRFMAPLHHH PLGSTDFSGD IGLNYGLNYG AADLNFHIGG 240 ASSLLSGVGG SGVEQWRMAP PPPPLQFPFL PAGLDPNSGA ATGLFEGEMA SGFSVRGKQP 300 PPSSSITHQM AAVKMEDTNN NQGEMNLSRQ LLGINNHHQH DHHDHNQYWS TGTGNSSSTS 360 ANWTDLSGFS SSSNYEQ

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MVFSSLPAYH HHHHDPSNWQ QQPNHPITGI STTTTAAAAS VITSQQLLSP LVPSLPPPPS  60
QPHGSGGAGS IRPGSMADRA RMANIPMPET ALKCPRCEST NTKFCYFNNY SLTQPRHFCK  120
TCRRYWTRGG ALRNVPVGGG CRRNKRSKGT SSSSGGGGGG SSSKSSAATA SGSSGAIPSN  180
NSGAASAAEI LGLTQQLPAA LRFMAPLHHH PLGSTDFSGD IGLNYGLNYG AADLNFHIGG  240
ASSLLSGVGG SGVEQWRMAP PPPPLQFPFL PAGLDPNSGA ATGLFEGEMA SGFSVRGKQP  300
PPSSSITHQM AAVKMEDTNN NQGEMNLSRQ LLGINNHHQH DHHDHNQYWS TGTGNSSSTS  360
ANWTDLSGFS SSSNYEQ

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00483	DAP	Transfer from AT5G02460	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010111483.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010111483.1	0.0	dof zinc finger protein DOF5.1
TrEMBL	W9S882	0.0	W9S882_9ROSA; Dof zinc finger protein
STRING	XP_010111483.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF656	34	143

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	7e-48	Dof family protein

Link Out ? help Back to Top
Entrez Gene	21404167