PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111708.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 267aa    MW: 29496.7 Da    PI: 8.0175
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111708.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00094177199123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C+k+F+++  L  H  +H
  XP_010111708.1 177 FECSSCKKVFRSHQALGGHRASH 199
                     89**************9999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.13E-56389No hitNo description
PfamPF139124.2E-76488IPR007087Zinc finger, C2H2
SMARTSM003550.0256486IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.5566486IPR007087Zinc finger, C2H2
PROSITE patternPS0002806686IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.600.0016686IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.3E-9177200IPR007087Zinc finger, C2H2
SMARTSM003550.26177199IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.471177204IPR007087Zinc finger, C2H2
PROSITE patternPS000280179199IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MNNVFDFQHN LPLIPAPPST HHDCASTSAA AKHHPKPRKK RSSNSKPPPP PPLQSGVVSA  60
ESVRACSECG KKFWSWKALF GHMRCHPERH WRGINPPPSH RRPANSDPVI ASQHDILEDY  120
EIAACLLLLA NNGNDNHNDI IHNYDHHHHH HHVEGNKNDN NNNNNSTTVS HVSCAFFECS  180
SCKKVFRSHQ ALGGHRASHK NVKGCFAMTR TSSNSTSTGD IHDNNFGLDF DLNLPAGMES  240
HDNAYCLVSS SYSSSPGLAN LDLRLAL
Functional Description ? help Back to Top
Source Description
UniProtMediates the regulation of male germ cell division by DUO1. {ECO:0000269|PubMed:24876252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111708.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Activated by the transcription factor DUO1. {ECO:0000269|PubMed:21285328}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111708.10.0zinc finger protein ZAT3
SwissprotO654991e-40ZAT3_ARATH; Zinc finger protein ZAT3
TrEMBLW9SJ460.0W9SJ46_9ROSA; Zinc finger protein ZAT3
STRINGXP_010111708.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF6667710
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.15e-42C2H2-like zinc finger protein