PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111930.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 407aa    MW: 46161.6 Da    PI: 8.1296
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111930.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20123173255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd s ng  +r++lg+f+taeeAa a+++a+++++g
  XP_010111930.1 123 HYRGVRRRP-WGKYAAEIRDSSRNG--ARVWLGTFDTAEEAALAYDKAALRIRG 173
                     8********.**********55465..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-31122182IPR001471AP2/ERF domain
CDDcd000185.18E-30122181No hitNo description
SMARTSM003804.6E-38123187IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-23123183IPR016177DNA-binding domain
PROSITE profilePS5103223.96123181IPR001471AP2/ERF domain
PfamPF008471.1E-14123173IPR001471AP2/ERF domain
PRINTSPR003674.8E-11124135IPR001471AP2/ERF domain
PRINTSPR003674.8E-11147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MAVHRDQHHQ SEGILENVWA SFISGEVVNE DIISNNTSEM FSKTREELPP LDGGDGSAAM  60
LRRLPSLGRW ISMGAETWEE LLDSIILPNQ SNVGHDEQSC KGNSADQGKE ADPERAKKVV  120
TKHYRGVRRR PWGKYAAEIR DSSRNGARVW LGTFDTAEEA ALAYDKAALR IRGPKAYLNF  180
PLETVAKAVG QDGSGFNSNC SSTATYGNRD LIASNPRKRG SREWEENGMI ILRRRIRSFW  240
EKHIASRKDF AVQFEYEWYS LDKVIKEIRH GGNNVEEGVF GCLSLIGVCN PLILVNCSLS  300
GRDPADVVVF PLMLNITWKN DNFPLMNLLR RNLLIRALAD VLEFVVAMVV GVEKRRVQDE  360
YLRNTEMHCK GTLLKPWSAL RIEIVPINVY KILFRWQVKN ESMNLID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-28122182464ATERF1
3gcc_A5e-28122182464ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111930.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024031507.11e-169ethylene-responsive transcription factor 1B
TrEMBLW9SHD20.0W9SHD2_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010111930.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-29ERF family protein