PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010113177.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 217aa MW: 24582.2 Da PI: 6.3136

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010113177.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.2	1.9e-05	181	213	1	36
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapsk 36 +++ hn+ Er RR ++ ++ L +llP + + XP_010113177.1 181 KKQDHNAKERVRRMKLHASYLALGSLLPIS---GTS 213 6899************************87...444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	5.38E-5	179	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.708	180	217	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.1E-4	181	210	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MHYAAADSAT FRRVYTLHNS PSFALEAFDE LWLLEDHSST VAPTYTEINH LNPWRDLDFS 60 PHLEQGISVL AEESNNIEND GSRGNRFSTL IESSSTEPNM FGEQCSDTLQ NNTCTSRVEK 120 DLNANTFTGQ ERSIVADYLS TSVRKGFSSK KRERKSKIKH VETERSRELV ENEVEEQSLA 180 KKQDHNAKER VRRMKLHASY LALGSLLPIS GTSKVNT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010113177.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	W9SFU0	1e-160	W9SFU0_9ROSA; Uncharacterized protein
STRING	XP_010113177.1	1e-161	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18502	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	6e-12	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21383838