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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_010518733.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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| Family |
GRAS |
| Protein Properties |
Length: 527aa MW: 58848.7 Da PI: 5.3579 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010518733.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 393.6 | 2.1e-120 | 155 | 525 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l+e+L+e A+avs+gd++ a ++ l++++s +gdp+qRl ay++e+L+arl +s+s++ykal+++e + e ++++ +++e++P+ kf++
XP_010518733.1 155 LKEVLIEGARAVSEGDTATAFGCIDVLEQMVSVSGDPIQRLGAYMLEGLRARLEGSGSNIYKALKCKEPT---GRELMSYMGVLYEICPYWKFAY 246
5789*****************************************************************9...99999999************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
+ N aIlea+ e r+Hi+Df+i qG+Q++ L+q+La+Rp+gpp lR+Tg+++++s+ + l+ +ge+L++fA+++gvpfef+ + + +
XP_010518733.1 247 ISSNAAILEAMVDEPRIHIVDFQIAQGTQYVYLIQQLAKRPGGPPLLRLTGLDDSQSNyaRGGGLSLVGEKLSRFAQSCGVPFEFQD-GMMSGCE 340
******************************************************999999999***********************9.7889999 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
++ e+L vkpg a+aVn+ + lh+++desvs++++rd++L+lv+slsPk+v+++eqe+++n+++Fl rf+e+l+yy+a+f+s++a+ re+eeri
XP_010518733.1 341 VQREHLGVKPGFAIAVNFPYVLHHMPDESVSVHNHRDRLLQLVRSLSPKLVTLIEQESNTNTSPFLSRFMETLDYYTAMFESIDAGRRREDEERI 435
*********************************************************************************************** PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E+++++r+ivn++ ce+ er+erhe l+kWr+r+++aGF p +ls++++ +++ ll+ ++ + yr+ ++g+l+l Wk+r++ ++SaW+
XP_010518733.1 436 RAEQHCVARDIVNMIGCEEGERVERHELLGKWRMRMMMAGFMPCELSTSVVWEVNQLLKGFDPN-YRLAGSDGALFLLWKRRAMSTCSAWT 525
**************************************************************55.*************************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 527 aa
Download sequence Send
to blast |
MQTSQKHQTA SGLHMLYPQL YCSPQFQVVD KNALSNNPPE EHFFTLESST ASGSLPAYDS 60
PSVSVSSNHS PFSPQASHSC LSDPRQSPDN VYGSPFSGSS SYTCDEAEFK NKIRELEFSL 120
MSCDSKSVEF SGFIPGATKS WNWNELLALT PQLDLKEVLI EGARAVSEGD TATAFGCIDV 180
LEQMVSVSGD PIQRLGAYML EGLRARLEGS GSNIYKALKC KEPTGRELMS YMGVLYEICP 240
YWKFAYISSN AAILEAMVDE PRIHIVDFQI AQGTQYVYLI QQLAKRPGGP PLLRLTGLDD 300
SQSNYARGGG LSLVGEKLSR FAQSCGVPFE FQDGMMSGCE VQREHLGVKP GFAIAVNFPY 360
VLHHMPDESV SVHNHRDRLL QLVRSLSPKL VTLIEQESNT NTSPFLSRFM ETLDYYTAMF 420
ESIDAGRRRE DEERIRAEQH CVARDIVNMI GCEEGERVER HELLGKWRMR MMMAGFMPCE 480
LSTSVVWEVN QLLKGFDPNY RLAGSDGALF LLWKRRAMST CSAWTSP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
