PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010520066.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 333aa    MW: 37122.8 Da    PI: 9.6372
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010520066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.4e-104686545
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                    k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_010520066.1 46 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
                    7889************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-642105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384488IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.35E-74689No hitNo description
PfamPF001707.0E-74686IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-74791No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141443.7E-34128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MADTSPRTSV STDADTDHRD QRFEGGQLGI VASDSSDRSK DKLDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSSG DQAHSTGGNG AMAFDVEYSR  120
WQEDKNRQMN ELRSAINAHA SDAELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK  180
PPAERCFLWL GGFRSSELLK LVATQLEPLT EQQSIGIINL QQSSHQAEDA LSQGMEALQQ  240
SLAETLSNGT LGSSGSSGNV ANYMGQMAMA MGKLGTLEGF IRQADNLRLQ TLQQMLRILT  300
TRQSARALLA IHEYSSRLRA LSSLWLARPR DSA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010520066.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010520066.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010520067.10.0PREDICTED: transcription factor TGA6-like isoform X1
SwissprotQ391400.0TGA6_ARATH; Transcription factor TGA6
TrEMBLA0A3Q0ERI90.0A0A3Q0ERI9_VIGRR; transcription factor TGA2.2 isoform X3
TrEMBLE4MX780.0E4MX78_EUTHA; mRNA, clone: RTFL01-10-O14
TrEMBLV4KRR30.0V4KRR3_EUTSA; Uncharacterized protein
STRINGXP_010520066.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-166TGACG motif-binding factor 6