PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010520887.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

NZZ/SPL

Protein Properties

Length: 347aa MW: 37629.6 Da PI: 8.8014

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010520887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	246.6	1.2e-75	1	307	1	292
NOZZLE 1 matslffmstdqnsvrnpnell.rntrlvvnssgeirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaa 94 matslffm+tdqn np+ ll rnt+lv +geir+e+ +srgrkpgsk+a q+qkk rgmgva+ler + +eekk + d+s ++ XP_010520887.1 1 MATSLFFMATDQNPAANPQALLpRNTHLV--GTGEIRSEPPRSRGRKPGSKAA-QNQKKIRQRGMGVAQLERLREQEEKK-M-----ADAS--ST 84 9*****************9989*..9***************87.5899***********9888876.4.....4777..68 PP NOZZLE 95 isntatrlpvp..vdrgv..vlqgfps..........................slgssrilcggvgsgqvmidp..visp..wgfvetsatthel 155 i+n tr+p+p v g vlqg+ps s+ +c g+ sgq+ +dp v sp wgf+ets el XP_010520887.1 85 IPNPNTRFPIPdpVVIGSfpVLQGLPSyggpticpvvgpsgsgsgpvvpkinrSFTRFAGFCCGTESGQIPVDPppVYSPetWGFIETSK---EL 176 999999999862233332459**************9988888888765555555558********545999999**99... PP NOZZLE 156 ssisnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmipppmngydeyllqsdhhqrsqgflydqriaraa.svsaasasinpyfn 249 ss++np +yn+s +rc+ cfkkkr dgd +rsnggg+ +y mi p+ng+d ++ ++++ g yd+r a +v+a +n n XP_010520887.1 177 SSMPNPHVYNCS--DRCEVCFKKKRYDGDG---IRSNGGGICRYGMIS-PVNGHDTPVFVQERNIPISG--YDHRNGYLArTVTAPPGPLNC-SN 262 ********97..58*********9...*********96.69*8888885555555..899976655145777777875.69 PP NOZZLE 250 eatnltgsreefgsvlegnprngsrg..vkeyeffpgkydervsk 292 ++n+ gs+e +gs++ gnprng +keyeffpgk++ + +k XP_010520887.1 263 PCSNYEGSMEMLGSYMRGNPRNGGPApiIKEYEFFPGKHETFSGK 307 9******************754449*********99887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	1.1E-67	3	306	IPR014855	Plant transcription factor NOZZLE
Pfam	PF08744	1.4E-4	308	347	IPR014855	Plant transcription factor NOZZLE

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0048653	Biological Process	anther development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence Send to blast
MATSLFFMAT DQNPAANPQA LLPRNTHLVG TGEIRSEPPR SRGRKPGSKA AQNQKKIRQR 60 GMGVAQLERL REQEEKKMAD ASSTIPNPNT RFPIPDPVVI GSFPVLQGLP SYGGPTICPV 120 VGPSGSGSGP VVPKINRSFT RFAGFCCGTE SGQIPVDPPP VYSPETWGFI ETSKELSSMP 180 NPHVYNCSDR CEVCFKKKRY DGDGIRSNGG GICRYGMISP VNGHDTPVFV QERNIPISGY 240 DHRNGYLART VTAPPGPLNC SNPCSNYEGS MEMLGSYMRG NPRNGGPAPI IKEYEFFPGK 300 HETFSGKHET FPGKYGQRAY PKEMEAPVVS VGDCSTNTSA IDLSLKL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence Send to blast

MATSLFFMAT DQNPAANPQA LLPRNTHLVG TGEIRSEPPR SRGRKPGSKA AQNQKKIRQR  60
GMGVAQLERL REQEEKKMAD ASSTIPNPNT RFPIPDPVVI GSFPVLQGLP SYGGPTICPV  120
VGPSGSGSGP VVPKINRSFT RFAGFCCGTE SGQIPVDPPP VYSPETWGFI ETSKELSSMP  180
NPHVYNCSDR CEVCFKKKRY DGDGIRSNGG GICRYGMISP VNGHDTPVFV QERNIPISGY  240
DHRNGYLART VTAPPGPLNC SNPCSNYEGS MEMLGSYMRG NPRNGGPAPI IKEYEFFPGK  300
HETFSGKHET FPGKYGQRAY PKEMEAPVVS VGDCSTNTSA IDLSLKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010520887.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010520887.1	0.0	PREDICTED: protein SPOROCYTELESS-like
TrEMBL	Q2HZF8	7e-68	Q2HZF8_BRAJU; Sporocyteless
STRING	XP_010520887.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM13435	18	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27330.1	2e-72	sporocyteless (SPL)