PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010520981.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 429aa    MW: 46395.6 Da    PI: 6.0714
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010520981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.76.8e-15229281358
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                     + kr+rr+ +NRe+ArrsR+RK+++  eLe+ v +L  eN++L k+l+    +  k
  XP_010520981.1 229 DTKRARRMLSNRESARRSRRRKQEQKNELETQVGQLRVENSTLLKRLSD---MNHK 281
                     67*****************************************966554...4444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-17227291IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-10228280No hitNo description
PROSITE profilePS5021711.473229281IPR004827Basic-leucine zipper domain
PfamPF001701.8E-13230280IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-10231280No hitNo description
PROSITE patternPS000360234249IPR004827Basic-leucine zipper domain
PfamPF124981.0E-17298400IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MNSLFSVDDL TDSFWETAAP AAMAEGISRS QSEWAFQRLI EEMSASGGSS IAGLSSAAEN  60
AIDRSVPQIQ PEQSVSMPSG AGSDIAADIF ETQKLENHRH RWDEQGSRNH VSSSTIGVDP  120
DQYHAILKSK LDLACAAVAL RVAMVKPEDS STTATKQKQP ILVGSEAQGS AAAQISPGTS  180
SVSASPSPGM QKKSDVPVGQ ATSGSSRDDS DDDELEGDME TTENGDPADT KRARRMLSNR  240
ESARRSRRRK QEQKNELETQ VGQLRVENST LLKRLSDMNH KHDTAAVDNR ILKADIETMR  300
TKVKMAEETV KRVTGMNHLL FARPNSTNMG LPFDNTLMDS SRIGLTPALP NSNHILKSAM  360
PNIIGTAPNG RLDNCFGNNT LVPPNMNSVT NASAENMTNI PLPQQASSPN LVPTPPQWNH  420
DVTKNKAQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243250RRSRRRKQ
2245250SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010520981.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010520981.10.0PREDICTED: basic leucine zipper 25
SwissprotQ9M1G61e-104BZP25_ARATH; Basic leucine zipper 25
TrEMBLA0A1J3I3581e-124A0A1J3I358_NOCCA; Basic leucine zipper 25
STRINGXP_010520981.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58482645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.19e-90basic leucine zipper 25
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Jain P, et al.
    A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation.
    Sci Rep, 2017. 7(1): p. 14343
    [PMID:29084982]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]