PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010521099.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 139aa    MW: 15191 Da    PI: 5.65
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010521099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-171362255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykG+r++k +g+Wv+eIr+p +   r r +lg+f tae+Aa a++ a  +l+ 
  XP_010521099.1 13 KYKGIRRRK-WGKWVSEIRVPGT---RDRLWLGSFSTAEGAAMAHDVAYFCLHR 62
                    8*****998.**********943...5************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.85E-171374IPR016177DNA-binding domain
PROSITE profilePS5103220.8631374IPR001471AP2/ERF domain
CDDcd000184.20E-271374No hitNo description
SMARTSM003802.6E-251380IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-251375IPR001471AP2/ERF domain
PfamPF008472.4E-91360IPR001471AP2/ERF domain
PRINTSPR003674.0E-91425IPR001471AP2/ERF domain
PRINTSPR003674.0E-93652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MESNGGGREE RNKYKGIRRR KWGKWVSEIR VPGTRDRLWL GSFSTAEGAA MAHDVAYFCL  60
HRPSSDLESC LNFPQLLSLP SFASLTSPSS IQRAASDAGM AIDASFSLTA PQGTAPSPVV  120
DEPLTISVYD YDLDDHSPL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010521099.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010521099.11e-99PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I83e-52ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A3P6BLW32e-54A0A3P6BLW3_BRACM; Uncharacterized protein
STRINGXP_010521099.15e-99(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38652860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-54ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]