PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010522157.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 226aa    MW: 25307.2 Da    PI: 6.5608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010522157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-2097146355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng  +r++lg+f+taeeAa a+++a+ +l+g
  XP_010522157.1  97 YRGVRRRP-WGKYAAEIRDSTRNG--RRVWLGTFDTAEEAALAYDQAAFALKG 146
                     9*******.**********44465..************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.40696154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-3096155IPR001471AP2/ERF domain
PfamPF008477.8E-1596146IPR001471AP2/ERF domain
SMARTSM003806.8E-3896160IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-2397156IPR016177DNA-binding domain
PRINTSPR003672.7E-1197108IPR001471AP2/ERF domain
CDDcd000181.95E-3097156No hitNo description
PRINTSPR003672.7E-11120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MSGYVIFKLN ATAKKNTQER EKEEMESSLF PNYQRQDFSS SSSSSSLSSQ ETSSLFWSDE  60
FFFEGESGLS IPNRYQTIKG EEYNVEGISK GKGERSYRGV RRRPWGKYAA EIRDSTRNGR  120
RVWLGTFDTA EEAALAYDQA AFALKGALAV LNFPVHVVRE SLQNLNLFDG GSPVMALKRI  180
HSLQSRPRGR KGSKDTTNQE TGNGTLLVLE DLGAEFLEQL LMSSCD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-28971541572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:11950980}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010522157.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Weakly induced by Pseudomonas syringae tomato (avirulent avrRpt2 strain), but also by mock inoculation. {ECO:0000269|PubMed:11950980}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010522157.11e-166PREDICTED: ethylene-responsive transcription factor 15-like isoform X1
SwissprotQ8VYM06e-63ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLA0A1J3EXM95e-63A0A1J3EXM9_NOCCA; Ethylene-responsive transcription factor 15
STRINGXP_010522157.11e-166(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM22752876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.12e-52ethylene-responsive element binding factor 15
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang H, et al.
    Arabidopsis AtERF15 positively regulates immunity against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea.
    Front Plant Sci, 2015. 6: p. 686
    [PMID:26388886]