PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010522873.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 430aa    MW: 49295.9 Da    PI: 6.6194
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010522873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM118.94.6e-3751313128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +Gf F+P+d+el+++yLk+k+ g++  ++++i+ev+iy ++Pw+L+ + k++++++  wyf ++ +kk+     ++r+t+sg+Wk+tg + +++ 
  XP_010522873.1   5 VGFGFRPRDDELISHYLKHKILGETWLVDNAISEVNIYAFDPWELRfQsKIDTSHDgVWYFLFRPEKKK----MQSRKTRSGFWKKTGPTLDIKP 95 
                     7************************999899**************842466555553667766666654....57888899************99 PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  ++ ++g kk+Lvf++gr+p+g+ t+Wvmhey+ 
  XP_010522873.1  96 RrgNHGKIGEKKVLVFHRGRTPNGVGTEWVMHEYHT 131
                     8666677***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100540.1223149IPR003441NAC domain
PfamPF023656.1E-215130IPR003441NAC domain
SuperFamilySSF1019414.71E-375149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MDRIVGFGFR PRDDELISHY LKHKILGETW LVDNAISEVN IYAFDPWELR FQSKIDTSHD  60
GVWYFLFRPE KKKMQSRKTR SGFWKKTGPT LDIKPRRGNH GKIGEKKVLV FHRGRTPNGV  120
GTEWVMHEYH TSSFLPDQRT YIICRIEFKG KDPNVPHANA IEPSHSFVTN LNNVGDWSST  180
SEVNQPVHGN SGSYNWQAGL SMGELQSMNQ FSANLDTQQQ VPYWDEDEMQ MFLDSLNGES  240
LDFMLDEQDT PSYNVMQQNC NDYRPQKALT GTYMDDSSDS DDASSSLSSS VTSRGETSSW  300
VAGSASSSNG HLQTHKNNNL ESSTDHYHHE ESRSLQKHVK GEYQSVMQRK EEVRRVADAS  360
EKESSCLEKI EMEGKRARDR FRKTSDSNTK KKGWFVLEDV VDKSRTNELI NMIIGMVLLV  420
FLIPLITSVR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-21613018139Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010522873.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010522873.10.0PREDICTED: NAC domain-containing protein 69-like
STRINGXP_010522873.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.13e-68NAC domain containing protein 69