PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010523851.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 277aa    MW: 30802.2 Da    PI: 5.3631
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010523851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.51.5e-28189353128
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++ w+fFs+r++ky+++kr+nr+t++gyWk tg+d++++ ++++++g+kktLvfy+gr p+g ktdWvmhey+ 
  XP_010523851.1  18 EDDQIWHFFSPRNTKYSKSKRSNRKTENGYWKVTGRDRSIKGTSKKVIGTKKTLVFYRGRVPSGIKTDWVMHEYHS 93 
                     356689********************************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100533.7661111IPR003441NAC domain
SuperFamilySSF1019413.53E-3118111IPR003441NAC domain
PfamPF023659.9E-151992IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MKLLTKSTST GQSKIQSEDD QIWHFFSPRN TKYSKSKRSN RKTENGYWKV TGRDRSIKGT  60
SKKVIGTKKT LVFYRGRVPS GIKTDWVMHE YHSSALTPDK GIYVLCKVIH KSKSEISVSS  120
GGGAEPSHPL PCVSEDHVTT EQTFETIGQA EETPNSVCNT GGFDTDLGLM WDELDEESPM  180
LDSILLNDFS FIDNIPLLSE FCSPLEDLEV ETQSMPQFAN SVSANHSSET VHSQMQSDLI  240
TWSCPDHSSN IDSETVSLWM NQCSPGASAG ERSFNTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-20239271139Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010523851.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010523851.10.0PREDICTED: NAC domain-containing protein 69-like isoform X2
STRINGXP_010523847.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-31NAC transcription factor-like 9