PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010524069.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 239aa    MW: 26420.6 Da    PI: 8.9609
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010524069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like45.71.4e-1410392655
         G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    +AtPk +l lm++kgL+++hvkSHLQ+YR+
  XP_010524069.1 10 EATPKLVLGLMNLKGLSIAHVKSHLQMYRS 39
                    7****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-12940IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-9941IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MLGFAMEVAE ATPKLVLGLM NLKGLSIAHV KSHLQMYRSK KLDESSNAAR PGMINGKTMR  60
KSGSLLEMLN YGYIPYGEFR HVYNSEAILT RELELRSGNQ ELLMVNPAKG VLADLGVNRL  120
VQPSGLCSGF NGNQWRPVSR SCDGDDSECK TLPLLEIKKT TGEKRRRDKA QLSEELEVIK  180
QAKIISREGN LLPELGLSLC QAFGSCRKQK LGEDIKTMLV LSLFPTSSGD QNMTSNIET
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010524069.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010524069.11e-176PREDICTED: uncharacterized protein LOC104802260 isoform X2
STRINGXP_010524068.11e-166(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42660.12e-40G2-like family protein