PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010525257.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 401aa    MW: 44562.1 Da    PI: 5.773
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010525257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.51.2e-31872281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgy. 82 
                     lp+G++F+Ptdee++ e+L++k+  +       l   e     v ++v+i++++P++Lp  ++++  +++fF+k+ ++y tg+rk+r +t +g  
  XP_010525257.1  87 LPKGVKFEPTDEEII-EHLEAKCGIDGlephvlL---EefirpVTEDVGINYTHPENLP-GANKDGVSIFFFHKTVQAYGTGQRKRRrITPTGLn 176
                     799************.99****887775565542...14445468889***********.445566799*****************966654433 PP

             NAM  83 .....WkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                          W++tg++k+v+  +g ++g+kk++v+yk   + +k+ek++Wv+h+y+l
  XP_010525257.1 177 depvrWHKTGRTKPVML-NGVQKGCKKIMVLYKSarKGSKPEKSNWVLHQYHL 228
                     34444************.999***********5433666778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-3672246IPR003441NAC domain
PROSITE profilePS5100529.93187246IPR003441NAC domain
PfamPF023651.7E-1388228IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MGKRFRSGGI GGGVNRRFLN VVIDSYGKDV SAEDIVDDLR SKYRDFGRLS RHVLLLLPTK  60
DCGAYIECPN CTHRIDNTNV LMPWPGLPKG VKFEPTDEEI IEHLEAKCGI DGLEPHVLLE  120
EFIRPVTEDV GINYTHPENL PGANKDGVSI FFFHKTVQAY GTGQRKRRRI TPTGLNDEPV  180
RWHKTGRTKP VMLNGVQKGC KKIMVLYKSA RKGSKPEKSN WVLHQYHLGT EGNDIGEYVI  240
SKISYQQQKH GEKNVGEEEV PEEGEHSRAH GSPRTPNTKT PTPPRPVNTI SGVGEAFDAT  300
KMLDPLVQGL ENIPEASSES TWSAGAVEDS NMNRIEDNLK CKEHIEDNPT SGVENANLFG  360
ELELESGNFA ISDLENADLG SPPEFLSLAS QDSLLNWLGW L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164168RKRRR
2165169KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010525257.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010525257.20.0PREDICTED: NAC domain-containing protein 8-like
TrEMBLA0A087H6731e-168A0A087H673_ARAAL; Uncharacterized protein
STRINGXP_010525257.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50452651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-148NAC domain containing protein 44