PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010525524.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 196aa MW: 22021 Da PI: 10.5351

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010525524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.8e-16	125	167	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe kv +Le+eNk+L+ XP_010525524.1 125 RRQKRMIKNRESAARSRARKQAYTHELEIKVLQLEEENKRLRR 167 79***************************************94 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.3E-14	120	168	No hit	No description
SMART	SM00338	6.8E-11	121	178	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.254	123	168	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.88E-10	125	170	No hit	No description
CDD	cd14707	2.03E-21	125	170	No hit	No description
Pfam	PF00170	4.6E-13	125	168	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	128	143	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence Send to blast
LSKKTVDEVW REIQQSKRGG SAQERKDKRQ KQSTTLGEMT LEDLLLKAGV VTETIPDPNE 60 AGNGGSCPTG LGQHIPQHGP WLQYQAFMPY PVSEMQAMMG GLSDTQAPGR NRVASGDVVG 120 KTVERRQKRM IKNRESAARS RARKQAYTHE LEIKVLQLEE ENKRLRRQKE VEKVLPSAPP 180 PPDPKRQLQR TSSAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010525524.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010525458.1	1e-142	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_010525524.2	1e-143	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2, partial
Refseq	XP_019056828.1	1e-142	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	2e-94	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M4CST2	6e-93	M4CST2_BRARP; Uncharacterized protein
TrEMBL	V4NE97	1e-92	V4NE97_EUTSA; Uncharacterized protein
STRING	XP_010525458.1	1e-141	(Tarenaya hassleriana)
STRING	XP_010525524.1	1e-142	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1884	28	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	7e-97	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]