PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010525527.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 199aa    MW: 22330.3 Da    PI: 10.3271
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010525527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.73.9e-16125167547
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                     +r++r++kNRe+A rsR+RK+a++ eLe kv +Le+eNk+L+ 
  XP_010525527.1 125 RRQKRMIKNRESAARSRARKQAYTHELEIKVLQLEEENKRLRR 167
                     79***************************************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-14120168No hitNo description
SMARTSM003386.6E-14121197IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.254123168IPR004827Basic-leucine zipper domain
PfamPF001704.7E-13125168IPR004827Basic-leucine zipper domain
CDDcd147071.50E-21125170No hitNo description
SuperFamilySSF579592.94E-10125170No hitNo description
PROSITE patternPS000360128143IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
LSKKTVDEVW REIQQSKRGG SAQERKDKRQ KQSTTLGEMT LEDLLLKAGV VTETIPDPNE  60
AGNGGSCPTG LGQHIPQHGP WLQYQAFMPY PVSEMQAMMG GLSDTQAPGR NRVASGDVVG  120
KTVERRQKRM IKNRESAARS RARKQAYTHE LEIKVLQLEE ENKRLRRQKE VEKVLPSAPP  180
PPDPKRQLQR TSSAPVEID
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010525527.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010525527.11e-145PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2, partial
SwissprotQ9LES34e-93AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLM4CST22e-91M4CST2_BRARP; Uncharacterized protein
TrEMBLV4L2754e-91V4L275_EUTSA; Uncharacterized protein
TrEMBLV4NE974e-91V4NE97_EUTSA; Uncharacterized protein
STRINGXP_010525527.11e-144(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-95ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]