PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010525827.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 207aa    MW: 22853.3 Da    PI: 7.5722
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010525827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-192979256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +ykGVr +  +g+Wv+eIr+p+    + kr++lg+++ +e+Aa+a++aa  +++ge
  XP_010525827.1 29 CYKGVRKRA-WGKWVSEIRVPR----TgKRIWLGSYDAPEKAARAYDAALYCIRGE 79
                    8*****887.**********95....25**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.5E-332992IPR001471AP2/ERF domain
PROSITE profilePS5103221.8122986IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-272987IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-202987IPR016177DNA-binding domain
PfamPF008471.4E-112979IPR001471AP2/ERF domain
CDDcd000181.92E-303088No hitNo description
PRINTSPR003677.9E-93041IPR001471AP2/ERF domain
PRINTSPR003677.9E-95268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MDMMPPSPPK SPFLSSSLEE VRRDGKFKCY KGVRKRAWGK WVSEIRVPRT GKRIWLGSYD  60
APEKAARAYD AALYCIRGER GVFNFPTDKK PQLPEGSSVQ PLSRKDIQAI ATSHASSHAP  120
VSSHAATLTV TAQVPSHVPI PIPVPVVPVP VPVTTDLPVP TESVRIPEMV SEPYVPVNAT  180
ADPIFSVEDL QLDNFLMMDI DWINDLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1630881574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010525827.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010525826.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
RefseqXP_010525827.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
RefseqXP_010525830.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
RefseqXP_010525831.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
RefseqXP_010525832.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
RefseqXP_010525833.11e-150PREDICTED: ethylene-responsive transcription factor ERF015 isoform X1
SwissprotQ6NLD52e-95ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLA0A384LCY26e-93A0A384LCY2_ARATH; Uncharacterized protein
TrEMBLC0SVK96e-93C0SVK9_ARATH; Uncharacterized protein At4g31060 (Fragment)
STRINGXP_010525826.11e-149(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.17e-74ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]