PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010526444.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 220aa    MW: 23641.1 Da    PI: 4.6289
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010526444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-174190154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    ++y+GVr +  +g+Wv+eIr+p++   + r++lg+f ta+ Aa+a++aa++  +
  XP_010526444.1 41 PCYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFATADAAARAHDAAALTVK 90
                    68*****998.**********843...6*********************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.6E-124191IPR001471AP2/ERF domain
SMARTSM003806.1E-3442105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-3142100IPR001471AP2/ERF domain
PROSITE profilePS5103222.5374299IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2142100IPR016177DNA-binding domain
PRINTSPR003672.7E-104354IPR001471AP2/ERF domain
CDDcd000186.89E-1843101No hitNo description
PRINTSPR003672.7E-106581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MSSMVDSPHS DADSAVSTTE STSPSDETTR TKNKKRVRPD PCYRGVRMRT WGKWVSEIRE  60
PRKKSRIWLG TFATADAAAR AHDAAALTVK GSSAVLNFPE LAACLPRPAS ASPRDVQAAA  120
AIAAAMDISS ASGEAKSPPS VSSEASTSSA DDLSEILELP SLETGRDAPR NEFVFDDSVI  180
PGSPWYFSNC YSYYRSEDDG TAIGEVFESP NFGPLFSLEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-17431001573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00245DAPTransfer from AT1G77200Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010526444.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010526444.11e-158PREDICTED: ethylene-responsive transcription factor ERF037
SwissprotO806542e-67ERF37_ARATH; Ethylene-responsive transcription factor ERF037
TrEMBLR0I5F42e-68R0I5F4_9BRAS; Uncharacterized protein
STRINGXP_010526444.11e-158(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18528283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77200.12e-38ERF family protein