PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010526700.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 249aa    MW: 28387.6 Da    PI: 7.7014
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010526700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11137184350
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     e+++ +r+++NRe+ArrsR+RK+  ie L++ +  L  eN++L +++ 
  XP_010526700.1 137 ERRKRMRMESNRESARRSRKRKQNHIEDLRNQMSRLGVENRELTNRIR 184
                     56889**************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-12134199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-9136184No hitNo description
PROSITE profilePS5021710.105137200IPR004827Basic-leucine zipper domain
PfamPF001701.3E-8137184IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.42E-10139190No hitNo description
CDDcd147021.72E-14140187No hitNo description
PROSITE patternPS000360143157IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLSTVPAFSI AEPAFSDFQT GFTHWDWVCS DLFSVIESSL KPAGTDPCSD DPGDHVKQTS  60
GSRNTKPDSD DSIAGSIEMN SGSGYTNAFD GKPSPRHDDQ DSGEMKNLIT GSAECTHNRT  120
EMNGPVSDPT VFQVVDERRK RMRMESNRES ARRSRKRKQN HIEDLRNQMS RLGVENRELT  180
NRIRVVLYHI QRVSTDNNRL VAEQEILRRR LSEMRRILIL KQLQHQWARN HSSVITTEQN  240
PSSIIHQII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138157RKRMRMESNRESARRSRKRK
2151157RRSRKRK
3151158RRSRKRKQ
4153158SRKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010526700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010526700.10.0PREDICTED: light-inducible protein CPRF2-like
TrEMBLA0A1J3G1312e-76A0A1J3G131_NOCCA; Basic leucine zipper 43 (Fragment)
TrEMBLA0A1J3G9Q72e-76A0A1J3G9Q7_NOCCA; Basic leucine zipper 43 (Fragment)
STRINGXP_010526700.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78551840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-68basic leucine-zipper 6