PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010526869.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

NAC

Protein Properties

Length: 279aa MW: 31521 Da PI: 8.3047

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010526869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.7	3.5e-47	8	134	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yL++ ++gk+ + evi ++iy+++PwdLp k +e+ewyfF++rd+k+ tg r++r+t++gyWkatg+d++++s XP_010526869.1 8 PGFRFHPTEEELLSFYLRNMIHGKRSCI-EVIGFLNIYHYDPWDLPGLSKIGEREWYFFVPRDRKHGTGGRPSRTTAKGYWKATGSDRKIVSLse 101 9**********************888.99***********8778899*********************************99765 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++gl+ktLvfy+grap g+ktdWvm+eyrl XP_010526869.1 102 PKRVIGLRKTLVFYRGRAPGGNKTDWVMNEYRL 134 6778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-56	5	152	IPR003441	NAC domain
PROSITE profile	PS51005	53.985	6	152	IPR003441	NAC domain
Pfam	PF02365	1.8E-25	8	134	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MAKENELPGF RFHPTEEELL SFYLRNMIHG KRSCIEVIGF LNIYHYDPWD LPGLSKIGER 60 EWYFFVPRDR KHGTGGRPSR TTAKGYWKAT GSDRKIVSLS EPKRVIGLRK TLVFYRGRAP 120 GGNKTDWVMN EYRLPDSCPL PKDVVLCKIY RKATSRKVLE QRAAMDEMEG KASQTYPTSP 180 LSSSETMASC GTQNDLIAHI PTPQLPQVVA MEENNEISIQ ESHVENEEGK GPSSSLKLPF 240 GSLPELQVPK SGTDWGQDPL LSISPWLQNL TPIVNLLNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	2e-44	8	155	22	171	NAC domain-containing protein 19
3swm_B	2e-44	8	155	22	171	NAC domain-containing protein 19
3swm_C	2e-44	8	155	22	171	NAC domain-containing protein 19
3swm_D	2e-44	8	155	22	171	NAC domain-containing protein 19
3swp_A	2e-44	8	155	22	171	NAC domain-containing protein 19
3swp_B	2e-44	8	155	22	171	NAC domain-containing protein 19
3swp_C	2e-44	8	155	22	171	NAC domain-containing protein 19
3swp_D	2e-44	8	155	22	171	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010526869.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010526869.1	0.0	PREDICTED: NAC domain-containing protein 35
Swissprot	Q10S65	6e-88	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	D7L8Q9	1e-148	D7L8Q9_ARALL; ANAC036
STRING	XP_010526869.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3899	28	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-150	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]