PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010528055.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 335aa    MW: 36582.7 Da    PI: 4.4658
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010528055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.42.3e-15126174153
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     s+  GVr++k +g+W+AeIr+p     + +r +lg++ t eeAa a+ a ++++
  XP_010528055.1 126 SKPIGVRQRK-WGKWAAEIRHPI----TkARTWLGTYQTLEEAADAYAAKKLEF 174
                     6889*****9.**********72....36******************9988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-9126173IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-14127175IPR016177DNA-binding domain
PROSITE profilePS5103217.741127184IPR001471AP2/ERF domain
PRINTSPR003673.1E-6128139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-19130174IPR001471AP2/ERF domain
CDDcd000184.13E-19130172No hitNo description
SMARTSM003801.9E-11130181IPR001471AP2/ERF domain
PRINTSPR003673.1E-6150166IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MPEPRKRSLS QTNKPSESPK AKAFLLNHLP GLSEDLKVTR KIRIVVNDPY ATDYSSSEDE  60
DEMGREKVPK LRRFVREINL PFSRASLAEP EGSSCRESND GGKTKISTCN KKLSSKTSRE  120
GRFGVSKPIG VRQRKWGKWA AEIRHPITKA RTWLGTYQTL EEAADAYAAK KLEFDSLAAA  180
ASGQNPKPVV SSDVSESSLS NPYASHESDT MASVSASGSN VVAEDLVEGS ELGDMVKGGF  240
DFNFADLQIP ELDSLVDEPL VSNGSELDFL FMEENGHFLD EYCGIDDMDI FGLEGDGPSE  300
LPDCDFSDID IDLGGASDKF AFADHIATPL NIVCP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010528055.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010528055.10.0PREDICTED: ethylene-responsive transcription factor ERF119-like
SwissprotQ9LUA21e-105EF119_ARATH; Ethylene-responsive transcription factor ERF119
TrEMBLE4MXS21e-128E4MXS2_EUTHA; mRNA, clone: RTFL01-28-P02
TrEMBLV4K5P71e-128V4K5P7_EUTSA; Uncharacterized protein
STRINGXP_010528055.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.21e-103ERF family protein