PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010528149.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 193aa    MW: 22157.1 Da    PI: 4.8222
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010528149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.11.4e-1361262128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      pGf ++ td ++v++ Lk+kv + ++    +i ++ d+   +P +Lp    +++++ yfF kr ++         +t s yW   g++k++l+ 
  XP_010528149.1   6 SPGFLYSLTDIQIVDCLLKRKVLDPTFCN-MIIGDFdDLPCKDPCTLP----GRDTKRYFFGKRLRNV--------ITVSRYWTPIGQEKRILDP 87 
                     79**********************99766.579999789999******....467899***9987754........56778*************9 PP

             NAM  96 .kgelvglkktLvfy..kgrap...kgektdWvmheyrl 128
                      ++e+vg++ktL++   +g+ p   +  ++ W+m eyrl
  XP_010528149.1  88 eSKEVVGIRKTLALVhsDGKMPffhNQPRSLWFMYEYRL 126
                     67788*******99955344432225569********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-184145IPR003441NAC domain
PROSITE profilePS5100524.3145145IPR003441NAC domain
PfamPF023651.5E-87126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MDFPLSPGFL YSLTDIQIVD CLLKRKVLDP TFCNMIIGDF DDLPCKDPCT LPGRDTKRYF  60
FGKRLRNVIT VSRYWTPIGQ EKRILDPESK EVVGIRKTLA LVHSDGKMPF FHNQPRSLWF  120
MYEYRLAEMH GTDQQEWAVY CVFLKETKTY HDIHLWIESE TDESEESGGE EKDDGDQIGQ  180
AGNSSGIGPP PAT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010528149.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010528149.11e-144PREDICTED: NAC domain-containing protein 83-like
STRINGXP_010528149.11e-143(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18062786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-16NAC domain containing protein 83