PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010529099.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 120aa    MW: 13863 Da    PI: 9.6891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010529099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.15.3e-141952239
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgta 39
                    +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+t 
  XP_010529099.1 19 RYRGVRQRP-WGKWAAEIRDP-----HkvARVWLGTFDTT 52
                    7********.**********7.....448*********94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.30E-171953No hitNo description
SuperFamilySSF541716.41E-121954IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.7E-191954IPR001471AP2/ERF domain
PROSITE profilePS5103215.8831953IPR001471AP2/ERF domain
PfamPF008473.0E-81953IPR001471AP2/ERF domain
SMARTSM003807.9E-111976IPR001471AP2/ERF domain
PRINTSPR003674.3E-92031IPR001471AP2/ERF domain
PRINTSPR003674.3E-94258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MEAKPLQNFS ASSKGRPRRY RGVRQRPWGK WAAEIRDPHK VARVWLGTFD TTETCPTKIF  60
VGLSGVDLFM ADVKALEAYA GYFHYLPKLW SRLLPEVYEP EAVADYFSCR PHVVAFRLLE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010529099.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010529099.12e-85PREDICTED: ethylene-responsive transcription factor 12-like, partial
TrEMBLV4MBT85e-26V4MBT8_EUTSA; Uncharacterized protein
STRINGXP_010529099.17e-85(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.17e-12ERF family protein