PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010531056.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 169aa    MW: 18702.7 Da    PI: 6.2586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010531056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.27.1e-132673552
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
                    ++ +r+ +NRe+ArrsR RK++ ++ L+  + +L++eN++    l+  
  XP_010531056.1 26 RKRKRMVSNRESARRSRMRKQKHMDDLTAQINQLTNENRQIMTSLDVT 73
                    578999********************************9988777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-111867No hitNo description
SMARTSM003382.1E-162286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.6342487IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.73E-122677No hitNo description
PfamPF001703.6E-102671IPR004827Basic-leucine zipper domain
CDDcd147025.31E-202778No hitNo description
PROSITE patternPS0003602944IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MASSSGTYRS SSPVSDGSPS SAVDERKRKR MVSNRESARR SRMRKQKHMD DLTAQINQLT  60
NENRQIMTSL DVTSRLYMTI QAENSVLNAQ LSELNTRLRS LDDIIGFVTA NTNSSSSSSS  120
GEIDGCGFVD RTVGIHDDLY DDMFSGVNQP WGGSLHANQP IMANDIIMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12546RKRKRMVSNRESARRSRMRKQK
23845RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010531056.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010531056.11e-122PREDICTED: bZIP transcription factor 2-like
SwissprotQ9SI151e-63BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A3P6DCM24e-70A0A3P6DCM2_BRAOL; Uncharacterized protein
STRINGXP_010531056.11e-121(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.14e-63basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]