PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010532941.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 636aa    MW: 70678.1 Da    PI: 4.9818
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010532941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.2e-31110164155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prlrWt eLH++Fv+av +LGG+++AtPkti+e+m+v+gL+l+hvkSHLQk+Rl
  XP_010532941.1 110 RPRLRWTVELHTSFVNAVMKLGGPNRATPKTIMEIMEVEGLALHHVKSHLQKFRL 164
                     59****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.9E-27107164IPR009057Homeodomain-like
SuperFamilySSF466891.24E-13109164IPR009057Homeodomain-like
TIGRFAMsTIGR015579.9E-24111165IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MSGGDMLGRE KMGFAQSSEM GTERREKGKG VVTVDESPNS DDDLLDQYEI VDFMFLVEQE  60
TEGAQVQNGT PNVNSEAGVR SEGSSEKEGE GGAGSSSKIR PCLFITADQR PRLRWTVELH  120
TSFVNAVMKL GGPNRATPKT IMEIMEVEGL ALHHVKSHLQ KFRLGKCIVK EWPEQPKKRS  180
RAIRRAARAA CASTSAPRPQ VDILPKIAPR PPLTPTDIQG SLYMKLEADM HLKRCLEVQR  240
MQMESSNQQM EEQRQHSIET ASSSQFHDYN SHYNPTTFSA PPTQELDQEP SCYNMMSDSY  300
GFPQHVMDHP FPIPEPQPMM DHHQHDQLQH HQLLQHDNGY SIHDPWYNVS APLPTPAGPF  360
DHGFPPTMAN PCPIYESPHL MYGQTQETAP PGLTLQQDMA DLYHPSYDPY PMYDRTTVTA  420
PQLQPWFSNG FSVQDPSPSH LYGLPPHNMA DPCPGPTRSA TGQVPPQFNT SGSIQDHAPL  480
QISGLTPRAM PEPSYPTYGP CPMTGLTTPT PTTGQIMQPQ FNNSYPMQEP LTVTNPRPVY  540
GQRSYPPYNT LEMVKIQLEA EAAAAAARRS EGTSRTPPQE IMAEPSGPTS VAAVPTLTEN  600
MADHVVDEYI DWDKVGEVNE VEFDPVEFLI SFGFGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-17110166258Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010532941.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010532941.20.0PREDICTED: uncharacterized protein LOC104808826
STRINGXP_010532941.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM134061520
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G06020.14e-34G2-like family protein