PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010533264.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family TALE
Protein Properties Length: 297aa    MW: 33941.6 Da    PI: 6.7893
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010533264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.18e-102222601854
                     HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     lF+   ++yp+ +e+  LA+++gL+++qV++WF N R +
  XP_010533264.1 222 LFQHflHPYPNDSEKLMLASETGLSKNQVSNWFINARVR 260
                     5775569******************************88 PP
2BELL96.62.1e-3189160172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     e++e+q++ akL+ lle+V+ r+ +y++ql+ vi sFe++ag gsakpYt lAl+a++rhF +L+dai++qi
  XP_010533264.1  89 ENREVQIRVAKLVGLLEQVEARFDKYCDQLEHVIISFEEIAGSGSAKPYTGLALQAMTRHFGSLQDAIISQI 160
                     689********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-1519158IPR006563POX domain
PfamPF075266.0E-2927156IPR006563POX domain
SMARTSM003893.9E-10204268IPR001356Homeobox domain
CDDcd000863.20E-11204265No hitNo description
Gene3DG3DSA:1.10.10.602.0E-27209270IPR009057Homeodomain-like
SuperFamilySSF466891.15E-17209272IPR009057Homeodomain-like
PfamPF059202.1E-17221260IPR008422Homeobox KN domain
PROSITE profilePS5007111.872223264IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MEERREGKHF ETNPEMEELG IRHGCSSSRY SKAARCLLEE VIDIGGREVE LCNEFLMQEL  60
FPGRRRGGFG LSAEIKAELC SSGFMSPPEN REVQIRVAKL VGLLEQVEAR FDKYCDQLEH  120
VIISFEEIAG SGSAKPYTGL ALQAMTRHFG SLQDAIISQI NSARRKHSQD LPRISSGLSR  180
LGLFETNKLK HCPQVSSLQL KHAWRPIRGL PDTSISILRA WLFQHFLHPY PNDSEKLMLA  240
SETGLSKNQV SNWFINARVR LWKPMIEEMY REEFAYSLEE SNRPRNGISM DREGVED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-18210271566Homeobox protein Meis2
3k2a_B3e-18210271566Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010533264.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010533264.10.0PREDICTED: BEL1-like homeodomain protein 11 isoform X1
SwissprotQ1PFD11e-136BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLR0I7661e-135R0I766_9BRAS; Uncharacterized protein
STRINGXP_010533264.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM97362734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-133BEL1-like homeodomain 11