PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010533509.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NZZ/SPL
Protein Properties Length: 321aa    MW: 34822.8 Da    PI: 8.5387
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010533509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE213.51.3e-6513211314
          NOZZLE   1 matslffmstdqnsvrnpnellr..ntrlvvnssgeirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssva 93 
                     mat lffm++dqn   +p  +l   nt++v   +geir+e+ +srgrkpgsk+a  +qkk   rgmgva+ler + +eekk +      dts  +
  XP_010533509.1   1 MATPLFFMAADQNPAAKPPGVLLplNTHVV--GTGEIRSEPPRSRGRKPGSKAA-LNQKKIRQRGMGVAQLERLREQEEKK-M-----ADTS-SS 85 
                     9************99998887752377777..9*******************87.58999***************988887.3.....5888.56 PP

          NOZZLE  94 aisntatrlpvpvdrgv.....vlqgfps..............slgs.sri..lcggvgsgqvmidp..vis..pwgfvetsatthelssisnpq 162
                     ++sn  trlpv +d+ v     vlqg+ps                gs sr+  +c g+gsgq++idp  v s   wgf ets    elss+++p 
  XP_010533509.1  86 TMSNPNTRLPV-LDPVVfgsfpVLQGLPScggpaicpvpvvpkITGSfSRFagFCCGTGSGQILIDPapVYSseTWGFAETSK---ELSSMPKPH 176
                     789999****6.45444333669***************9999745557777558************744555337******99...********* PP

          NOZZLE 163 mynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmipppmngydeyllqsdhhqrsqgf.lydqriaraasvsaasasinpyfneatnltg 256
                     +yn+s  +rc+ cfkkkr             gg+sky mi  pmng+d  ++ ++++    g+   d  +ara+  + +  + np  ne     g
  XP_010533509.1 177 LYNCS--DRCEVCFKKKR------------HGGISKYGMIS-PMNGHDAPVFVQERNIPRIGYdHSDGYLARATLPPGSLNCSNPCVNE-----G 251
                     ***97..58********9............3899*****96.7******888877666666662457789**998888889999*9998.....8 PP

          NOZZLE 257 sreefgsvlegnprngsr.gvkeyeffpgkydervskvakva.........slvgdcspn..tidlslkl 314
                     s+e +gs++ gnprng +   keyeffpgky+++ +k  ++a          +v dc  +  +idlslkl
  XP_010533509.1 252 SMEMLGSYVRGNPRNGGHiPPKEYEFFPGKYENFSGKYGQMAytremeapeISVSDCITDtsAIDLSLKL 321
                     9**************976268*************99876655222222222479999988667*****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087441.2E-614321IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MATPLFFMAA DQNPAAKPPG VLLPLNTHVV GTGEIRSEPP RSRGRKPGSK AALNQKKIRQ  60
RGMGVAQLER LREQEEKKMA DTSSSTMSNP NTRLPVLDPV VFGSFPVLQG LPSCGGPAIC  120
PVPVVPKITG SFSRFAGFCC GTGSGQILID PAPVYSSETW GFAETSKELS SMPKPHLYNC  180
SDRCEVCFKK KRHGGISKYG MISPMNGHDA PVFVQERNIP RIGYDHSDGY LARATLPPGS  240
LNCSNPCVNE GSMEMLGSYV RGNPRNGGHI PPKEYEFFPG KYENFSGKYG QMAYTREMEA  300
PEISVSDCIT DTSAIDLSLK L
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010533509.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010533509.10.0PREDICTED: protein SPOROCYTELESS isoform X1
STRINGXP_010533509.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM134351828
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.11e-59sporocyteless (SPL)