PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010533510.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NZZ/SPL
Protein Properties Length: 317aa    MW: 34345.2 Da    PI: 8.4676
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010533510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE194.87e-6013171314
          NOZZLE   1 matslffmstdqnsvrnpnellr..ntrlvvnssgeirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssva 93 
                     mat lffm++dqn   +p  +l   nt++v   +geir+e+ +srgrkpgsk+a  +qkk   rgmgva+ler + +eekk +      dts  +
  XP_010533510.1   1 MATPLFFMAADQNPAAKPPGVLLplNTHVV--GTGEIRSEPPRSRGRKPGSKAA-LNQKKIRQRGMGVAQLERLREQEEKK-M-----ADTS-SS 85 
                     9************99998887752377777..9*******************87.58999***************988887.3.....5888.56 PP

          NOZZLE  94 aisntatrlpvpvdrgv.....vlqgfps..............slgs.sri..lcggvgsgqvmidp..vis..pwgfvetsatthelssisnpq 162
                     ++sn  trlpv +d+ v     vlqg+ps                gs sr+  +c g+gsgq++idp  v s   wgf ets    elss+++p 
  XP_010533510.1  86 TMSNPNTRLPV-LDPVVfgsfpVLQGLPScggpaicpvpvvpkITGSfSRFagFCCGTGSGQILIDPapVYSseTWGFAETSK---ELSSMPKPH 176
                     789999****6.45444333669***************9999745557777558************744555337******99...********* PP

          NOZZLE 163 mynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmipppmngydeyllqsdhhqrsqgf.lydqriaraasvsaasasinpyfneatnltg 256
                     +yn+s     d c kk r             gg+sky mi  pmng+d  ++ ++++    g+   d  +ara+  + +  + np  ne     g
  XP_010533510.1 177 LYNCS-----DRCEKK-R------------HGGISKYGMIS-PMNGHDAPVFVQERNIPRIGYdHSDGYLARATLPPGSLNCSNPCVNE-----G 247
                     ***87.....345454.4............499******96.7******888877666666662457789**998888889999*9998.....8 PP

          NOZZLE 257 sreefgsvlegnprngsr.gvkeyeffpgkydervskvakva.........slvgdcspn..tidlslkl 314
                     s+e +gs++ gnprng +   keyeffpgky+++ +k  ++a          +v dc  +  +idlslkl
  XP_010533510.1 248 SMEMLGSYVRGNPRNGGHiPPKEYEFFPGKYENFSGKYGQMAytremeapeISVSDCITDtsAIDLSLKL 317
                     9**************976268*************99876655222222222479999988667*****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087445.6E-564317IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MATPLFFMAA DQNPAAKPPG VLLPLNTHVV GTGEIRSEPP RSRGRKPGSK AALNQKKIRQ  60
RGMGVAQLER LREQEEKKMA DTSSSTMSNP NTRLPVLDPV VFGSFPVLQG LPSCGGPAIC  120
PVPVVPKITG SFSRFAGFCC GTGSGQILID PAPVYSSETW GFAETSKELS SMPKPHLYNC  180
SDRCEKKRHG GISKYGMISP MNGHDAPVFV QERNIPRIGY DHSDGYLARA TLPPGSLNCS  240
NPCVNEGSME MLGSYVRGNP RNGGHIPPKE YEFFPGKYEN FSGKYGQMAY TREMEAPEIS  300
VSDCITDTSA IDLSLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010533510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010533510.10.0PREDICTED: protein SPOROCYTELESS isoform X2
STRINGXP_010533509.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.11e-54sporocyteless (SPL)