PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010534195.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 193aa    MW: 22542.7 Da    PI: 7.7216
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010534195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.84.8e-11176575128
             NAM  75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +r+  sgyWk++g  +++++ ++++ g kk L++y    ++g kt W mhey l
  XP_010534195.1  17 SRKSGSGYWKTSGMGTTIKK-GRSTLGYKKPLALY----KDGAKTGWHMHEYCL 65 
                     58889*************99.999***********....6899*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.166191IPR003441NAC domain
PfamPF023651.1E-71365IPR003441NAC domain
SuperFamilySSF1019411.07E-141491IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MRPLAITWLD PILYYFSRKS GSGYWKTSGM GTTIKKGRST LGYKKPLALY KDGAKTGWHM  60
HEYCLHKLRR QYDPRKQESM MLWVLCRIYK KKVAEKNMDK GKNDIDLDQT EETTLSTEEH  120
GEEREIMTTL STRPKSLDQD PISHLLADIN SIDFALLDYA IDDFILETGG FGEFYRENHH  180
RVVSDHQTMF QLP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010534195.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010534195.11e-144PREDICTED: NAC transcription factor 29-like
STRINGXP_010534195.11e-143(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-19NAC-like, activated by AP3/PI