PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010534338.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 305aa    MW: 34079.4 Da    PI: 9.8919
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010534338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.8e-104982639
                    HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                      rr+++NReAAr+sR+RKka++++Le+   +L+
  XP_010534338.1 49 TLRRLAQNREAARKSRLRKKAYVQQLENSRLKLT 82
                    569************************9655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-84391No hitNo description
SMARTSM003380.001744136IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.5194690IPR004827Basic-leucine zipper domain
PfamPF001702.1E-74984IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-75089No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141442.1E-20129178IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MADTSPRTSI STDADTDHRD QMFNGGQLVV AASDSSDRSK DKLDQKPQTL RRLAQNREAA  60
RKSRLRKKAY VQQLENSRLK LTQLEQEFQK SRQQGIFMSS SGDQAHSTGG NGAMAFDAEY  120
SRWQEEKSRH MNELRIKSNA AKNDVFHLLS GMWKTPAERC FLWLGGFRSS ELLKLVASQL  180
EPLTEQQSIG IINLQQSSQQ AEDALSQGMD ALQQSLAETL SNGTLGSSGS SGNVANYMGQ  240
MAMAMGKLGT LEGFIRQADN LRLQMLQQML RILTTRQSAR ALLAIHEYFS RLCALSSLWI  300
ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010534338.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010534338.10.0PREDICTED: transcription factor TGA6-like isoform X3
SwissprotQ391401e-168TGA6_ARATH; Transcription factor TGA6
TrEMBLA0A3Q0ERI91e-170A0A3Q0ERI9_VIGRR; transcription factor TGA2.2 isoform X3
TrEMBLQ93XA11e-170Q93XA1_PHAVU; TGA-type basic leucine zipper protein TGA2.1
STRINGXP_010534328.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06960.21e-149OCS-element binding factor 5