 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010534939.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
GRAS |
| Protein Properties |
Length: 520aa MW: 58564.6 Da PI: 5.1716 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010534939.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 263.9 | 5.3e-81 | 146 | 520 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkf 93
++lL cA a+ +g+ +++q++L+ ++elas++gdp+ Rlaa ++AL ++l++s+s+ +++ p+ + ++ +++ +++++ f+evsP++ f
XP_010534939.1 146 EQLLNPCAVAIMTGNSSRVQHYLCVIRELASSSGDPNYRLAAAGLRALTHHLSSSSSSSMSTWPALTFPSAEVK---MFQQTllkFYEVSPWFAF 237
689***************************************************99999999999999854444...44444456********** PP
GRAS 94 shltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefn 179
+ +aN+aIl+ +++e + +Hi+D+++s+G+QWp+Ll+aL+ Rp ++pp+++iT++++++++ ++ ++L fA++l++++++n
XP_010534939.1 238 PNNMANSAILQILAQEsrdkRDLHILDIGVSHGMQWPTLLEALSRRPeGPPPRIQITVISDQSKElpfsVGPPAYNYSSQLLTFAQSLNINLQIN 332
**************998777779************************55667*********99889998889999******************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalfdsl 271
vl l++l ++ +++ p+E+l+++ +++lh+l ++s ++er+e+Lk+++s Pk v+++e++a++ + ++F++r +++ley ++++ds+
XP_010534939.1 333 VLDNFPLQNLCFQVIDIAPHETLVICAQFRLHQLKHNS---PDERSEILKVLRSFGPKGVILSENNAECscsSCGDFATRYSKKLEYLWKFLDST 424
*8777*****************************9555...55566*******************98773233459******************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdr 365
++++ + + + Er+l++ e++++++ e ++ +e +ekW +r+++aGF + ++e+a + a++llrk++ +++ r+e+e+ + l Wk++
XP_010534939.1 425 NSGF----KGQDSEERKLMEGEATKALTSEREM----NEGKEKWFDRMRRAGFATEVFGEDAIDGARALLRKYDnNWEIRLEDEDTFAGLWWKGE 511
9997....555566778888899****999888....99***********************************888999999999999****** PP
GRAS 366 pLvsvSaWr 374
++ ++S W+
XP_010534939.1 512 SVSFCSLWK 520
********8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0042446 | Biological Process | hormone biosynthetic process |
| GO:2000032 | Biological Process | regulation of secondary shoot formation |
| Sequence ? help Back to Top |
| Protein Sequence Length: 520 aa
Download sequence Send
to blast |
MSLEESEPPS QNLDHILGWL EGSVSFTPFS GLDDPYFPHG FNGSQSWEWD QTQDFGHDLI 60
HNLTQDPSNN EEFMNDGTTD PVTGAPVIVP DPPPEPPQPS DQSRKRNSDA LVDVRAVKRP 120
ARRRRNINKS AGKSCNDGDK SERWAEQLLN PCAVAIMTGN SSRVQHYLCV IRELASSSGD 180
PNYRLAAAGL RALTHHLSSS SSSSMSTWPA LTFPSAEVKM FQQTLLKFYE VSPWFAFPNN 240
MANSAILQIL AQESRDKRDL HILDIGVSHG MQWPTLLEAL SRRPEGPPPR IQITVISDQS 300
KELPFSVGPP AYNYSSQLLT FAQSLNINLQ INVLDNFPLQ NLCFQVIDIA PHETLVICAQ 360
FRLHQLKHNS PDERSEILKV LRSFGPKGVI LSENNAECSC SSCGDFATRY SKKLEYLWKF 420
LDSTNSGFKG QDSEERKLME GEATKALTSE REMNEGKEKW FDRMRRAGFA TEVFGEDAID 480
GARALLRKYD NNWEIRLEDE DTFAGLWWKG ESVSFCSLWK
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 103 | 124 | RKRNSDALVDVRAVKRPARRRR |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
