PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010535297.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 226aa    MW: 25163.5 Da    PI: 4.7568
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010535297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.59.1e-16136187455
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     +kr rr+++NRe+ArrsR+RK+++++ Le  v++L +eN+ L k+l   +++
  XP_010535297.1 136 IKRLRRMYSNRESARRSRRRKQEQLQDLESQVENLRGENSVLYKQLIGATQQ 187
                     79**************************************999888665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.6E-12129197IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11131185No hitNo description
PROSITE profilePS5021710.898135181IPR004827Basic-leucine zipper domain
PfamPF001701.7E-12136181IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-11137185No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MDHRDNNDNT CMKRSASELA LEEYLMKAMS SSDSIPETAI NTCPPHPSSD SKNRDHTCGS  60
AESLFWFECI TPLATIDAQS SICENLSADS PLSANKPEAR GEGRRAGSGS YNDQSDEEDD  120
ETEAGLSEQA DDPNGIKRLR RMYSNRESAR RSRRRKQEQL QDLESQVENL RGENSVLYKQ  180
LIGATQQFRN ADTSNRVLKS DVETLRVKVK LAEDLVARGS LTSSLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149156RRSRRRKQ
2151156SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010535297.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010519592.11e-165PREDICTED: basic leucine zipper 9-like isoform X1
RefseqXP_010535297.11e-166PREDICTED: basic leucine zipper 9-like, partial
SwissprotQ9FUD31e-87BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A1J3FKF56e-93A0A1J3FKF5_NOCCA; Basic leucine zipper 9
STRINGXP_010519592.11e-165(Tarenaya hassleriana)
STRINGXP_010535297.11e-166(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM63702641
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-73basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]