PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010535363.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 249aa MW: 28274 Da PI: 6.6937

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010535363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.6	8.4e-11	97	141	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ +r ++NR++A++sR +K+++++ Le+k keLe + L+ ++ XP_010535363.1 97 RKLKRVISNRVSAQKSRIKKLQYVADLEKKHKELEMQVAVLRPQV 141 57899******************************9988777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.2E-9	93	157	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	8.0E-10	95	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.829	95	146	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.9E-12	97	148	No hit	No description
SuperFamily	SSF57959	2.89E-10	97	147	No hit	No description
CDD	cd14703	8.99E-16	98	149	No hit	No description
PROSITE pattern	PS00036	0	100	115	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
MEENDNNKSN GEEQGMFLTL ASPSMPVPLA PKSFQVWRET TPPPQPSDSN LTVLVDSSAD 60 DGGESSGPKK LGFINYEVEP GLTIRLRHNI DYDMDPRKLK RVISNRVSAQ KSRIKKLQYV 120 ADLEKKHKEL EMQVAVLRPQ VATAREHKRF AEMEQRDLNL RIAACNEHYR RTEAEIEAKK 180 VEFTRLMRKL ALQQQERGYD EGGGNEMVWG NGLSQPFDPN QNLNEPSAAA LMIPYSLLHP 240 DINMPPPRP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010535363.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010535363.1	0.0	PREDICTED: transcription factor HY5 isoform X1
STRING	XP_010535363.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM14418	18	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07160.1	1e-34	bZIP family protein