PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010535364.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 179aa MW: 20401.1 Da PI: 8.4582

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010535364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	8.9e-11	97	141	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ +r ++NR++A++sR +K+++++ Le+k keLe + L+ ++ XP_010535364.1 97 RKLKRVISNRVSAQKSRIKKLQYVADLEKKHKELEMQVAVLRPQV 141 57899******************************9988777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.2E-9	93	157	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	4.4E-10	95	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.829	95	146	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.45E-10	97	147	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.2E-12	97	148	No hit	No description
CDD	cd14703	3.22E-15	98	149	No hit	No description
PROSITE pattern	PS00036	0	100	115	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MEENDNNKSN GEEQGMFLTL ASPSMPVPLA PKSFQVWRET TPPPQPSDSN LTVLVDSSAD 60 DGGESSGPKK LGFINYEVEP GLTIRLRHNI DYDMDPRKLK RVISNRVSAQ KSRIKKLQYV 120 ADLEKKHKEL EMQVAVLRPQ VATAREHKRF AEMEQRDLNL RIAACNEHYR RTEATGERI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010535364.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010535364.1	1e-132	PREDICTED: transcription factor HY5 isoform X2
STRING	XP_010535363.1	1e-126	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07160.1	3e-32	bZIP family protein