PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010536509.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bHLH
Protein Properties Length: 191aa    MW: 21859.6 Da    PI: 6.6278
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010536509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH469.1e-152878355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + h e Er+RR+++ s +++Lr+llP  +   ++K s ++ + +Av+YIk+Lq
  XP_010536509.1 28 MIHRELERQRRQEMASLYATLRSLLPLHF--IKGKRSTSDQVNEAVNYIKHLQ 78
                    679************************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-152291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.42E-112382No hitNo description
PROSITE profilePS5088814.4752577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-122792IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-122878IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-83183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MSDSDPQKIT RSCKKLRPGG SEDNREKMIH RELERQRRQE MASLYATLRS LLPLHFIKGK  60
RSTSDQVNEA VNYIKHLQRN ISELSSKRDE LTLLSGGFES EEANNKSEGS RDSDVVEVHR  120
SLSGVEISIS SRCVQPRLSD FLQVVHEQGL CVHSCMSSKV DDRWIHTIQI EVDDPARIDI  180
TDLQDRLTQI M
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010536509.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010536509.11e-138PREDICTED: transcription factor bHLH36
SwissprotQ9FLI12e-58BH036_ARATH; Transcription factor bHLH36
TrEMBLA0A078IC521e-59A0A078IC52_BRANA; BnaAnng08070D protein
TrEMBLA0A3P6A1T71e-59A0A3P6A1T7_BRACM; Uncharacterized protein
STRINGXP_010536509.11e-137(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM44792754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.19e-61bHLH family protein