PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010536951.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 392aa    MW: 43535.1 Da    PI: 4.6145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010536951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-1972122155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+Wv+eIr+p   + r kr +lg+f ta+eAa a+++a+++++g
  XP_010536951.1  72 CRYRGVRQRT-WGKWVSEIREP---N-RgKRLWLGTFPTAYEAALAYDEAARAMYG 122
                     78*****999.**********8...3.35************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.27E-3172130No hitNo description
PfamPF008472.4E-1372122IPR001471AP2/ERF domain
PROSITE profilePS5103222.40573130IPR001471AP2/ERF domain
SMARTSM003804.4E-3673136IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-2173131IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-3273130IPR001471AP2/ERF domain
PRINTSPR003671.3E-97485IPR001471AP2/ERF domain
PRINTSPR003671.3E-996112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MPWKSGDRKR KSRSRGDGAT VAEILNKWKE YNEREETCSG GERGKKRARK APAKGSKKGC  60
MKGKGGPENG DCRYRGVRQR TWGKWVSEIR EPNRGKRLWL GTFPTAYEAA LAYDEAARAM  120
YGQSARLNFP GSCSIATTVS DSTTLSDGSE ICAVEDANVV PSSVEVKLED GNGEAVCCIP  180
KMAKAREGRQ VREQGSSDGY GNRQDLKEEP REQCSSDGYG VRQDLKEEPR ELSSSDDYGI  240
RQDVEEEPVL AVAAIDESTN SGEDELALGQ ESWQMLDVEE LLDLLEDNHL SARETKQDSE  300
AERPSDFTYQ MQYPDAKLLG SLNHMENVDS GFDYGLPIAR DNEKISDFFG LDLPSLDFGE  360
TRLVDSRIVA RDLGFAPKSP KVETFDCDCS TR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1763139581Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010536951.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010536951.10.0PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLR0FXH63e-89R0FXH6_9BRAS; Uncharacterized protein
STRINGXP_010536951.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM85322538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-46ERF family protein