PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010538191.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

VOZ

Protein Properties

Length: 474aa MW: 53093.8 Da PI: 5.4932

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010538191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	414.7	1.6e-127	203	421	1	217
VOZ 1 pppsaflgpkcalwdctrpaq.gsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 pppsaflgpkc+lwdc+rpa g++w++dycssfha+la+neg+pg++p++rp+gi+lkdgllfaalsak++gk+vgipecegaatakspwna+e XP_010538191.1 203 PPPSAFLGPKCSLWDCPRPATlGFDWFHDYCSSFHAALAFNEGPPGMNPIVRPGGIGLKDGLLFAALSAKADGKDVGIPECEGAATAKSPWNAPE 297 89***************965********************************************************************* PP VOZ 95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelkl 189 +fdls+lege irewlffdkprrafesgnrkqrslpdy grgwhesrkq+m+efgglkrsyymdpqp+ +fewhlyeyein+++a+alyrlelkl XP_010538191.1 298 IFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYCGRGWHESRKQIMNEFGGLKRSYYMDPQPLRHFEWHLYEYEINKCEACALYRLELKL 392 ******************************************************************************************9 PP VOZ 190 vd.ekksakgkvskdsladlqkklgrlta 217 + +kk++kgk s+ds+adlq ++grlta XP_010538191.1 393 AAvGKKNSKGKNSNDSVADLQTQMGRLTA 421 75389********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MTGKRIKTSC VSASHKLFKD KAKNRVDDLQ GMLTDLQFAR KESRTTDVTL LEEQVHQMLR 60 EWKAELNEPF PASSFHQQGG AFGSFSSDIC QLLQLCDEED DATSKLAAPK PEPSDRVLEV 120 GNNYIFQGGY DLVQEKPENG FPLPDHCKDF DGSAHLEYHH QYDLQLELEP DFNNGGFMDG 180 TGYGGEESLH ISTLMPPTIS ICPPPSAFLG PKCSLWDCPR PATLGFDWFH DYCSSFHAAL 240 AFNEGPPGMN PIVRPGGIGL KDGLLFAALS AKADGKDVGI PECEGAATAK SPWNAPEIFD 300 LSVLEGEIIR EWLFFDKPRR AFESGNRKQR SLPDYCGRGW HESRKQIMNE FGGLKRSYYM 360 DPQPLRHFEW HLYEYEINKC EACALYRLEL KLAAVGKKNS KGKNSNDSVA DLQTQMGRLT 420 ADNNKRCIIK VRPKVTGKMP GPKPYPVQNM TDPTNDDDKL QYGVAEEYSY LVGS

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MTGKRIKTSC VSASHKLFKD KAKNRVDDLQ GMLTDLQFAR KESRTTDVTL LEEQVHQMLR  60
EWKAELNEPF PASSFHQQGG AFGSFSSDIC QLLQLCDEED DATSKLAAPK PEPSDRVLEV  120
GNNYIFQGGY DLVQEKPENG FPLPDHCKDF DGSAHLEYHH QYDLQLELEP DFNNGGFMDG  180
TGYGGEESLH ISTLMPPTIS ICPPPSAFLG PKCSLWDCPR PATLGFDWFH DYCSSFHAAL  240
AFNEGPPGMN PIVRPGGIGL KDGLLFAALS AKADGKDVGI PECEGAATAK SPWNAPEIFD  300
LSVLEGEIIR EWLFFDKPRR AFESGNRKQR SLPDYCGRGW HESRKQIMNE FGGLKRSYYM  360
DPQPLRHFEW HLYEYEINKC EACALYRLEL KLAAVGKKNS KGKNSNDSVA DLQTQMGRLT  420
ADNNKRCIIK VRPKVTGKMP GPKPYPVQNM TDPTNDDDKL QYGVAEEYSY LVGS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010538191.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010538191.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	V4MQP3	0.0	V4MQP3_EUTSA; Uncharacterized protein
STRING	XP_010538191.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6667	27	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]