PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010542755.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 188aa    MW: 20749.2 Da    PI: 4.8675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010542755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-202068355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr++k +g+Wv+eIr+p   gk++r++lg+++tae+Aa+a++aa+  l+g
  XP_010542755.1 20 YRGVRRRK-WGKWVSEIREP---GKKTRIWLGSYDTAEMAAAAYDAAAVHLRG 68
                    9****998.**********8...557**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.6E-311977IPR001471AP2/ERF domain
PfamPF008474.1E-131968IPR001471AP2/ERF domain
PROSITE profilePS5103222.8931976IPR001471AP2/ERF domain
SMARTSM003803.3E-341982IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-222077IPR016177DNA-binding domain
CDDcd000181.40E-182078No hitNo description
PRINTSPR003672.1E-102031IPR001471AP2/ERF domain
PRINTSPR003672.1E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MENCHAGQQV QSFTVDQVSY RGVRRRKWGK WVSEIREPGK KTRIWLGSYD TAEMAAAAYD  60
AAAVHLRGQG PHLNFPDLAG SLPRPESSAA EHVQAAAQAA AMMVKSGRFP GTSPVTDETG  120
LCSGLGPVRV GLSDAQIQAI NEFPLDSPKM WCMGLDSVHV NDEEEPYGQF FGYDREDYVE  180
MQLQSIWD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1619761472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010542755.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010542755.11e-140PREDICTED: ethylene-responsive transcription factor ERF022
SwissprotQ9LQ284e-70ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLV4L1045e-76V4L104_EUTSA; Uncharacterized protein
STRINGXP_010542755.11e-139(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.11e-57ERF family protein